Posts

Last Fieldwork Season in China

I’m currently in Hangzhou, China at the Tea Research Institute(TRI) for my fourth and last time. It’s bitter sweet (like my favorite teas ;-) ) since I’m both glad to be nearing the end of my PhD, and sad to say goodbye to all the friends I’ve made and a city I’ve really grown to enjoy living in.

Retrieve chemical retention indices from NIST with {webchem}!

My PhD has involved learning a lot more than I expected about analytical chemistry, and as I’ve been learning, I’ve been trying my best to make my life easier by writing R functions to help me out.

Python is Weird (an unabashedly biased intro to Python for R users)

Last semester I took a class that used Python. It was my first time really seriously using any programing language other than R. The students were about half engineers and half biologists.

PhDrinking Podcast

I had the wonderful opportunity to be on Sadie Wit’s PhDrinking podcast. Check out the episode here and subscribe to PhDrinking wherever great podcasts are casted.

Cupcake Update

I know you’re all waiting on the edge of your seats for an update on the cupcakes vs. muffins data science project, but unfortunately I don’t have any answers to that age-old question* yet.

Cupcakes vs. Muffins

One thing I’ve learned from my PhD at Tufts is that I really enjoy working data wrangling, visualization, and statistics in R. I enjoy it so much, that lately I’ve been strongly considering a career in data science after graduation.

Importing data from a LI-COR photosynthesis meter into R

The LI-6400XT is a portable device used to measure photosynthesis in plant leaves. As you take measurements by pressing a button on the device, they are recorded into memory.

Quantifying leafhopper damage with automated supervised classification

As part of my fieldwork in China, I collected harvested tea leaves that were damaged by the tea green leafhopper. I want to quantify the amount of leafhopper damage for each harvest.

Making a website in RStudio

I’ve always thought I should eventually have a professional website for job hunting, but recently I’ve realized that it would be nice to have somewhere to collect my thoughts and contributions all in one place.